desparsify: De-sparsify gene-level mutation scores into gene set-level...

Description Usage Arguments Value

View source: R/desparsify.R

Description

De-sparsify gene-level mutation scores into gene set-level mutation scores.

Usage

1
desparsify(edgx, mutratecorx, ...)

Arguments

edgx

A binary matrix containing information on which genes belong to which gene sets. Output from the convertgmt function.

mutratecorx

Gene-level mutation scores corrected for the number of gene sets each gene belongs to (from sambar function).

Value

De-sparsified mutation data.


mararie/SAMBAR documentation built on Nov. 23, 2019, 12:36 a.m.