desparsify: De-sparsify gene-level mutation scores into gene set-level...
In mararie/SAMBAR: Subtyping Agglomerated Mutations By Annotation Relations
Description
Usage
Arguments
Value
Description
De-sparsify gene-level mutation scores into gene set-level mutation scores.
Usage
1
desparsify(edgx, mutratecorx, ...)
Arguments
edgx
A binary matrix containing information on which genes belong to which gene sets. Output from the convertgmt function.
mutratecorx
Gene-level mutation scores corrected for the number of gene sets each gene belongs to (from sambar function).
Value
De-sparsified mutation data.
mararie/SAMBAR documentation built on Nov. 23, 2019, 12:36 a.m.
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Description Usage Arguments Value
Description
De-sparsify gene-level mutation scores into gene set-level mutation scores.
Usage
1 | desparsify(edgx, mutratecorx, ...)
|
Arguments
edgx |
A binary matrix containing information on which genes belong to which gene sets. Output from the convertgmt function. |
mutratecorx |
Gene-level mutation scores corrected for the number of gene sets each gene belongs to (from sambar function). |
Value
De-sparsified mutation data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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