miRNAGenes: Get microRNA-target Interactions

View source: R/miRNAGenes.R

miRNAGenesR Documentation

Get microRNA-target Interactions

Description

Retrieve predicted and validated miRNA-target interactions using Multimir, miRNAtap and SpideRmiR R packages

Usage

miRNAGenes(DE.miRNA, DE.target)

Arguments

DE.miRNA

Character string or character vector of miRNA(s)

DE.target

Character string or character vector of mRNA(s)

Details

Requires several packages: multiMiR, miRNAtap, miRNAtap.db and SpidermiR. Not recomended to use this function as the database versions used in these packages are not up to date

Value

Returns a list of miRNAs, each containing a vector with all identified targets in DE.target

Author(s)

Julia Perera Bel <jperera@imim.es>


margenomics/microTargets documentation built on Aug. 22, 2023, 2:26 a.m.