miRNAGenes: Get microRNA-target Interactions
In margenomics/microTargets: Retrieve microRNA-target Interactions and Compute Correlations
miRNAGenes R Documentation
Get microRNA-target Interactions
Description
Retrieve predicted and validated miRNA-target interactions using Multimir,
miRNAtap and SpideRmiR R packages
Usage
miRNAGenes(DE.miRNA, DE.target)
Arguments
DE.miRNA
Character string or character vector of miRNA(s)
DE.target
Character string or character vector of mRNA(s)
Details
Requires several packages: multiMiR, miRNAtap, miRNAtap.db and
SpidermiR. Not recomended to use this function as the database versions
used in these packages are not up to date
Value
Returns a list of miRNAs, each containing a vector with all
identified targets in DE.target
Author(s)
Julia Perera Bel <jperera@imim.es>
margenomics/microTargets documentation built on Aug. 22, 2023, 2:26 a.m.
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| miRNAGenes | R Documentation |
Get microRNA-target Interactions
Description
Retrieve predicted and validated miRNA-target interactions using Multimir, miRNAtap and SpideRmiR R packages
Usage
miRNAGenes(DE.miRNA, DE.target)
Arguments
DE.miRNA |
Character string or character vector of miRNA(s) |
DE.target |
Character string or character vector of mRNA(s) |
Details
Requires several packages: multiMiR, miRNAtap, miRNAtap.db and SpidermiR. Not recomended to use this function as the database versions used in these packages are not up to date
Value
Returns a list of miRNAs, each containing a vector with all identified targets in DE.target
Author(s)
Julia Perera Bel <jperera@imim.es>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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