gorthoR: Orthologs from gOrtholog database
In markgene/gorthoR: R package
Description
Details
Author(s)
References
Description
GorthoR provides tools to get orthologs, alignments and
trees from gOrtholog database, an ortholog database at
Genentech. More information about each function can be
found in its help documentation.
Details
GetOrthologs - Find orthologs in other species, given
gene/protein IDs.
GetAllOrthologs - Get all orthologs in given species by
taxonomy IDs.
GetClusterId - Find orthologous cluster given gene/protein
IDs.
GetAlignment - Retrieve alignment of the given gene/protein
and its orthologs
GetTree - Retrieve tree of the given gene/protein and its
orthologs
Author(s)
Mark J Chen chenj99@gene.com
References
TBD
markgene/gorthoR documentation built on May 21, 2019, noon
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Description Details Author(s) References
Description
GorthoR provides tools to get orthologs, alignments and trees from gOrtholog database, an ortholog database at Genentech. More information about each function can be found in its help documentation.
Details
GetOrthologs - Find orthologs in other species, given gene/protein IDs.
GetAllOrthologs - Get all orthologs in given species by taxonomy IDs.
GetClusterId - Find orthologous cluster given gene/protein IDs.
GetAlignment - Retrieve alignment of the given gene/protein and its orthologs
GetTree - Retrieve tree of the given gene/protein and its orthologs
Author(s)
Mark J Chen chenj99@gene.com
References
TBD
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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