num2weightedfreq: num2weightedfreq
In markheron/pRon: pretty Representations of oligo-nucleotides
Description
Usage
Arguments
Value
View source: R/numeric_represenation.R
Description
Calculates the weighted oligo-nucleotide frequencies given a numerically encoded matrix representation.
Usage
1
num2weightedfreq(seqnum, weights, oligo_length)
Arguments
seqnum
(numeric matrix) numerically encoded oligo-nucleotide representation of DNA sequences
weights
(numeric) to be given to the fasta sequences (should have length matching ncol(seqnum))
oligo_length
(integer) length of the oligonucleotide-coding used (order+1)
Value
matrix of weighted oligonucleotide frequencies
markheron/pRon documentation built on Feb. 18, 2020, 12:33 a.m.
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Description Usage Arguments Value
View source: R/numeric_represenation.R
Description
Calculates the weighted oligo-nucleotide frequencies given a numerically encoded matrix representation.
Usage
1 | num2weightedfreq(seqnum, weights, oligo_length)
|
Arguments
seqnum |
(numeric matrix) numerically encoded oligo-nucleotide representation of DNA sequences |
weights |
(numeric) to be given to the fasta sequences (should have length matching |
oligo_length |
(integer) length of the oligonucleotide-coding used (order+1) |
Value
matrix of weighted oligonucleotide frequencies
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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