CopyEstimate-class: Container for results of fold change copy number estimation.
In markrobinsonuzh/Repitools: Epigenomic tools
CopyEstimate R Documentation
Container for results of fold change copy number estimation.
Description
Contains the genomic coordinates of regions, and fold change estimates.
Constructor
-
CopyEstimate(windows, unadj.CN, unadj.CN.seg)
Creates a CopyEstimate object.
windowsA GRanges object.
unadj.CNA matrix of fold changes.
unadj.CN.segA GRangesList object holding
the segmentation results.
Additional Slots
These are added to by absoluteCN or relativeCN
- type
A flag that contains if the copy number data is absolute or relative.
markrobinsonuzh/Repitools documentation built on March 20, 2024, 6:04 a.m.
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| CopyEstimate | R Documentation |
Container for results of fold change copy number estimation.
Description
Contains the genomic coordinates of regions, and fold change estimates.
Constructor
-
CopyEstimate(windows, unadj.CN, unadj.CN.seg)Creates a CopyEstimate object.windowsA
GRangesobject.unadj.CNA matrix of fold changes.
unadj.CN.segA
GRangesListobject holding the segmentation results.
Additional Slots
These are added to by absoluteCN or relativeCN
- type
A flag that contains if the copy number data is absolute or relative.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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