searchSubstrate: Show Cleaving Data for a Substrate by Uniprot accession
In martinry/proteasy: Protease Mapping
View source: R/searchSubstrate.R
searchSubstrate R Documentation
Show Cleaving Data for a Substrate by Uniprot accession
Description
Given a vector of proteins, finds known proteases acting on
cleavage sites.
Usage
searchSubstrate(protein, summarize = FALSE)
Arguments
protein
a vector of corresponding UniProt Accession IDs.
summarize
if false (default), provides a detailed table of all
associated cleaving events, otherwise outputs a summarized table and only
includes reviewed (Uniprot) entries.
Value
data.table, character
Examples
protein <- c("P05067", "P68871")
searchSubstrate(protein = protein)
martinry/proteasy documentation built on Feb. 5, 2024, 4:04 p.m.
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View source: R/searchSubstrate.R
| searchSubstrate | R Documentation |
Show Cleaving Data for a Substrate by Uniprot accession
Description
Given a vector of proteins, finds known proteases acting on cleavage sites.
Usage
searchSubstrate(protein, summarize = FALSE)
Arguments
protein |
a vector of corresponding UniProt Accession IDs. |
summarize |
if false (default), provides a detailed table of all associated cleaving events, otherwise outputs a summarized table and only includes reviewed (Uniprot) entries. |
Value
data.table, character
Examples
protein <- c("P05067", "P68871")
searchSubstrate(protein = protein)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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