substrates: Access resulting object from 'findProteases' function.
In martinry/proteasy: Protease Mapping
substrates R Documentation
Access resulting object from 'findProteases' function.
Description
'substrates' returns a 'data.table' with the
corresponding details derived from MEROPS.
Usage
## S4 method for signature 'Cleavages'
substrates(x)
Arguments
x
A 'data.table' object.
Value
A 'data.table' object.
Examples
protein <- c("P02671", "P02671", "P68871", "P01011")
peptide <- c("FEEVSGNVSPGTR", "FVSETESR", "LLVVYPW", "ITLLSAL")
res <- findProtease(protein = protein, peptide = peptide,
organism = "Homo sapiens")
substrates(res)
martinry/proteasy documentation built on Feb. 5, 2024, 4:04 p.m.
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| substrates | R Documentation |
Access resulting object from 'findProteases' function.
Description
'substrates' returns a 'data.table' with the corresponding details derived from MEROPS.
Usage
## S4 method for signature 'Cleavages'
substrates(x)
Arguments
x |
A 'data.table' object. |
Value
A 'data.table' object.
Examples
protein <- c("P02671", "P02671", "P68871", "P01011")
peptide <- c("FEEVSGNVSPGTR", "FVSETESR", "LLVVYPW", "ITLLSAL")
res <- findProtease(protein = protein, peptide = peptide,
organism = "Homo sapiens")
substrates(res)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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