In mathewchamberlain/SignacX: Cell Type Identification and Discovery from Single Cell Gene Expression Data
Quick start
The main functions in SignacX are:
install.packages('SignacX')
library(SignacX)
# Generate initial labels
labels = Signac(E = your_data_here)
# Generate cell type labels
celltypes = GenerateLabels(labels, E = your_data_here)
Where 'your_data_here' is either a Seurat object or a sparse matrix loaded from SPRING.
mathewchamberlain/SignacX documentation built on March 3, 2023, 2:46 a.m.
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Quick start
The main functions in SignacX are:
install.packages('SignacX') library(SignacX) # Generate initial labels labels = Signac(E = your_data_here) # Generate cell type labels celltypes = GenerateLabels(labels, E = your_data_here)
Where 'your_data_here' is either a Seurat object or a sparse matrix loaded from SPRING.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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