sumrep
perform annotations, clonal family clustering, or phylogenetic inference on my data?No -- at its core, sumrep
does not perform these sorts of inferences on your dataset.
It does, however, include helper functions to run several external annotation tools through R, including partis
, igblast
, and IGoR
.
See the Installation page for more information.
sumrep
process paired-end sequencing reads?Unfortunately, there is no current plan to support this sort of data directly. Please see the data specification for more details.
sumrep
compatible with?sumrep
should be compatible with contemporary versions of OS X and Linux.
sumrep
has not been tested on Windows.
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