getCAIs: Calculate the CAI for each gene
In maxconway/metabex: Metabolic Model Explorer
Description
Calculate the CAI for each gene
Usage
1
2
getCAIs(DNA, anngenes,
referenceGenes = anngenes@elementMetadata@listData$locus)
Arguments
DNA
a DNAString object, giving the whole genome
anngenes
a GRanges object, detailing how genes match to the genome
referenceGenes
the genes selected as being highly expressed enough to form a reference set
maxconway/metabex documentation built on May 21, 2019, 1:39 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Calculate the CAI for each gene
Usage
1 2 | getCAIs(DNA, anngenes,
referenceGenes = anngenes@elementMetadata@listData$locus)
|
Arguments
DNA |
a DNAString object, giving the whole genome |
anngenes |
a GRanges object, detailing how genes match to the genome |
referenceGenes |
the genes selected as being highly expressed enough to form a reference set |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.