SelectPredictor: SelectPredictor

In mbeccuti/PGS: PGS-Peculiar Genes Selection: a feature selection procedure for binary classification tasks.

Description

SelectPredictors takes a gene expression matrix with two values for each samples and compute the fold-change, defined as the difference in the gene expression levels between the two condition tested in the experiment. It returns a file containing only one value for each sample.

Usage

SelectPredictor(X)

Arguments

X	A gene expression matrix where each sample has two paired columns containing the gene expression levels of the DEGs detected using DEG_detection function in the two different biological condition tested.

Value

SelectPredictor creates a file containing a gene expression matrix where each column contains the difference in the gene expression levels for each sample.

Author(s)

Federica Martina

Examples

## The function is currently defined as
SelectPredictor('DEGs_file')

mbeccuti/PGS documentation built on May 23, 2019, 9:34 a.m.