calculate_prs_gtex: harmonise GTEx and query data and calculate polygenic risk...
In mbyvcm/MRCIEUGTEx: Functions for the analysis of GTEx data
Description
Usage
Arguments
Value
Description
harmonise GTEx and query data and calculate polygenic risk score
Usage
1
calculate_prs_gtex(query_data_frame, gtex_data_frame)
Arguments
query_data_frame
Data.frame with four columns: 'SNP','effect_allele','other_allele','beta'.
gtex_data_frame
Returned by extract_query_snps_gtex function
Value
Data.frame: polygenic risk score calculated in GTEX samples.
mbyvcm/MRCIEUGTEx documentation built on May 22, 2019, 12:58 p.m.
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Description Usage Arguments Value
Description
harmonise GTEx and query data and calculate polygenic risk score
Usage
1 | calculate_prs_gtex(query_data_frame, gtex_data_frame)
|
Arguments
query_data_frame |
Data.frame with four columns: 'SNP','effect_allele','other_allele','beta'. |
gtex_data_frame |
Returned by extract_query_snps_gtex function |
Value
Data.frame: polygenic risk score calculated in GTEX samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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