README.md
In mccabes292/actor: A latent dirichlet model to Compare expressed isoform proportions TO a Reference panel
ACTOR: A latent dirichlet model to Compare expressed isoform proportions TO a Reference panel
Overview
actor is an R package which takes transcript expression as input and uses a latent Dirichlet model to compare to GTEx tissues. actor provides gene level similarities to the GTEx tissues and identifies collections of genes, or gene classes, which align similarly to GTEx tissues.
Installing ACTOR
ACTOR is available as an R package which can be installed using devtools as follows.
library(devtools)
devtools::install_github("mccabes292/actor")
Vignettes
A vignette for running your own analysis using actor is available here
mccabes292/actor documentation built on March 1, 2020, 1:23 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
ACTOR: A latent dirichlet model to Compare expressed isoform proportions TO a Reference panel
Overview
actor is an R package which takes transcript expression as input and uses a latent Dirichlet model to compare to GTEx tissues. actor provides gene level similarities to the GTEx tissues and identifies collections of genes, or gene classes, which align similarly to GTEx tissues.
Installing ACTOR
ACTOR is available as an R package which can be installed using devtools as follows.
library(devtools)
devtools::install_github("mccabes292/actor")
Vignettes
A vignette for running your own analysis using actor is available here
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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