plotSpkBox: Boxplots of Fold Changes Calculated by spkBox

In mccallm/spkTools: Methods for Spike-in Arrays

Description

Plots boxplots of the data resulting from a call to spkBox.

Usage

plotSpkBox(boxs, fc=2, box.names=NULL, ...)

Arguments

boxs	the output of a call to spkBox
fc	expected fold change
box.names	names to be printed below each boxplot
...	parameters passed to boxplot

Value

Boxplots for spike-in and non-spike-in comparisons stratified by ALE strata are produced.

Author(s)

Matthew N. McCall

Examples

data(affy)
affySlope <- spkSlope(affy)
affyBox <- spkBox(affy, affySlope)
plotSpkBox(affyBox) 

mccallm/spkTools documentation built on May 7, 2019, 1:26 p.m.