spkAccSD: Accuracy Standard Deviation

In mccallm/spkTools: Methods for Spike-in Arrays

Description

Estimates the standard deviation for spike-ins at the lowest possible fold change in each bin.

Usage

spkAccSD(object, spkSlopeOut, tol=3)

Arguments

object	a SpikeInExpressionSet object
spkSlopeOut	the output from the spkSlope function
tol	number of digits after decimal point

Value

returns the median absolute deviation (MAD) for each bin.

Author(s)

Matthew N. McCall

Examples

data(affy)
affySlope <- spkSlope(affy)
spkAccSD <- spkAccSD(affy, affySlope)

mccallm/spkTools documentation built on May 7, 2019, 1:26 p.m.