Files in mchevalier2/crestr
A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

.Rbuildignore

.gitattributes

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.gitignore

CITATION.cff

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/cite_data.R R/createPSE.R R/crest.PSE_log.R R/crest.R R/crest.calibrate.R R/crest.get_modern_data.R R/crest.leave_one_out.R R/crest.reconstruct.R R/crest.set_modern_data.R R/crestObj.init.R R/crestObj.plot.R R/crestObj.print.R R/crestObj.summary.R R/data.R R/dbConnect.R R/dbCreateSubset.R R/dbDisconnect.R R/dbDownload.R R/dbFixedNames.R R/dbGetClimateSpace.R R/dbGetClimateXY.R R/dbGetDistribTaxa.R R/dbGetTaxonID.R R/dbGetTaxonomy.R R/dbRequest.R R/dbTestConn.R R/export.R R/export_pdfs.R R/getSpeciesDiversity.R R/includeTaxa.R R/isColourStr.R R/makeTransparent.R R/mod_fit_pdfsp.R R/pdf_ranges.R R/plot.climateSpace.R R/plot.combinedPDFS.R R/plot.diagram.R R/plot.explore_calibration_dataset.R R/plot.loo.R R/plot.scatterPDFS.R R/plot.speciesCharacteristics.R R/plot.utils.R R/plot.violinPDFS.R

R/sysdata.rda

R/taxonComposition.R R/utils-devel.R R/utils.R README.Rmd README.md

_pkgdown.yml

cran-comments.md crestr_1.4.3.pdf

data/M1.rda

data/crest_ex.rda

data/crest_ex_pse.rda

data/crest_ex_selection.rda

data/reconstr.rda

docs/404.html

docs/LICENSE-text.html

docs/LICENSE.html

docs/articles/calibration-data-v2.html

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docs/reference/reconstr.html

docs/reference/taxonComposition.html

docs/reference/testConnection.html

docs/sitemap.xml

index.Rmd index.md

inst/CITATION

man/M1.Rd man/PSE_log.Rd man/accBasinNames.Rd man/accClimateVariables.Rd man/accCountryNames.Rd man/accRealmNames.Rd man/calib_clim_space.Rd man/check_coordinates.Rd man/cite_climate_data.Rd man/cite_crest.Rd man/cite_distrib_data.Rd man/cite_method.Rd man/climate_from_xy.Rd man/close_db_connection.Rd man/colour_theme.Rd man/connect_local_sqlite3.Rd man/connect_online.Rd man/convert2percentages.Rd man/convert2presenceAbsence.Rd man/copy_crest.Rd man/createPSE.Rd man/crest.Rd man/crest.calibrate.Rd man/crest.get_modern_data.Rd man/crest.reconstruct.Rd man/crest.set_modern_data.Rd man/crest.simplify.Rd man/crestObj.Rd man/crest_ex.Rd man/crest_ex_pse.Rd man/crest_ex_selection.Rd man/crop.Rd man/dbDownload.Rd man/dbRequest.Rd man/dbSubset.Rd man/dot-ecoid2names.Rd man/dot-geopoid2names.Rd man/eqearth_get_ext.Rd man/excludeTaxa.Rd man/explore_calibration_dataset.Rd man/export.Rd man/export_pdfs.Rd man/f_locid.Rd

man/figures/README-plot-1.png

man/figures/README-plot-2.png

man/figures/README-plot-climate-space-1.png

man/figures/README-plot-plot_taxaCharacteristics-1.png

man/find.original.name.Rd man/fit_pdfsp.Rd man/fit_xrange.Rd man/getBasinNames.Rd man/getClimateSpace.Rd man/getCountryNames.Rd man/getDistribTaxa.Rd man/getRealmNames.Rd man/getResol.Rd man/getSpeciesdiversity.Rd man/getTaxaTypeFromTaxID.Rd man/getTaxonID.Rd man/getTaxonomy.Rd man/get_taxa_type.Rd man/identifyDatabase.Rd man/includeTaxa.Rd man/is.crestObj.Rd man/isColourStr.Rd man/loo.Rd man/makeTransparent.Rd man/meanPositiveValues.Rd man/normalise.Rd man/pdf_ranges.Rd man/plot.crestObj.Rd man/plot_climateSpace.Rd man/plot_combinedPDFs.Rd man/plot_diagram.Rd man/plot_loo.Rd man/plot_map_eqearth.Rd man/plot_scatterPDFs.Rd man/plot_taxaCharacteristics.Rd man/plot_violinPDFs.Rd man/reconstr.Rd man/taxonComposition.Rd man/testConnection.Rd

vignettes/.gitignore

vignettes/calibration-data-v2.Rmd vignettes/calibration-data-v3.Rmd vignettes/community.Rmd vignettes/databasing-with-crestr.Rmd vignettes/get-started.Rmd vignettes/technicalities.Rmd vignettes/theory.Rmd vignettes/warnings.Rmd

webpage/Test.csv

webpage/cheatsheet01.png

webpage/cheatsheet02.png

webpage/cheatsheet03.png

webpage/cheatsheet04.png

webpage/clim.csv

webpage/crest-use-01.png

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webpage/crest-use.R

webpage/crest-use.csv

webpage/crestr_cheatsheet.key

webpage/crestr_cheatsheet_thumbnail.png

webpage/crestr_cheatsheet_v1.3.0.pdf

webpage/distrib.csv

webpage/example-app.png

webpage/fig-crestrobj_v1.png

webpage/fig-gbif-v3.R

webpage/fig-gbif_v1.png

webpage/fig-gbif_v3.png

webpage/fig-gbiftables_v1.png

webpage/get-started.R

mchevalier2/crestr documentation built on Feb. 14, 2025, 6:31 p.m.

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mchevalier2/crestr
A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

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A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

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mchevalier2/crestr A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

Files in mchevalier2/crestr A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

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mchevalier2/crestr
A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets

Files in mchevalier2/crestr
A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets