selectVar.cia: Selecting variables from result of CIA
In mengchen18/omicade4: Multiple co-inertia analysis of omics datasets

Description Usage Arguments Details Value Author(s) See Also

To select variables in CIA variable space, the function is called by selectVar.

## S3 method for class 'cia'
selectVar(x, axis1 = 1, axis2 = 2, 
  df1.a1.lim = c(-Inf, Inf), df1.a2.lim = c(-Inf, Inf), 
  df2.a1.lim = df1.a1.lim, df2.a2.lim = df1.a2.lim, 
  sepID.data = NULL, sepID.sep = "_", ...)

`x`	The result returned by `cia`
`axis1`	Integer, the column number for the x-axis. The default is 1.
`axis2`	Integer, the column number for the y-axis. The default is 2.
`df1.a1.lim`	A vector containing 2 numbers indicating the range of X axis of selected on the 1st data.frame. The first value limiting the lower boundary, the second value limiting the upper boundary.
`df1.a2.lim`	The range of Y axis of selected on the 1st datasets.
`df2.a1.lim`	The range of X axis of selected on the 2nd dataset.
`df2.a2.lim`	The range of Y axis of selected on the 2nd dataset.
`sepID.data`	See `plotVar.mcia`
`sepID.sep`	See `plotVar.mcia`
`...`	Other arguments

cia projecting variables from different datasets to a two dimensional space. This function supplies a method selecting variables according to the co-ordinates of variables

Returns a data.frame describing which variables are presented on which data.frame within the limited region(s).

Chen Meng

See Also as selectVar.mcia

mengchen18/omicade4 documentation built on Nov. 2, 2020, 10:30 a.m.