Man pages for meowcat/RMassScreening
Suspect screening and time series in LC-HRMS data
| assignProfiles | Merge sample list information to a profile container |
| assignSamples | Map a sample list to sample IDs |
| batchPick | Batch pick raw mzXML files |
| combineReactions | Combinatorially apply transformations |
| computeProfiles | Compute profiles using enviMass. Wrapper for [agglomer()] and... |
| consolidateReactions | Merge reactions with identical mass differences |
| convertFormulas | Convert formulas to masses |
| cutSingleProfiles | Cut single profiles |
| fillProfiles | Fill enviMass profiles from picked files |
| generateSampleList | Generate sample table from filenames |
| loadRmsSettings | Load RMassScreening settings |
| makeProfileInfo | Extract essential info from profiles |
| makeProfileMatrix | Make matrix for use with ramclustR.df |
| mergeSuspects | Merge suspect lists |
| ppm | Calculate ppm distance from a mass. |
| processSpectra | Process RAMClust output for viewer |
| quickclust | Quick RAMClustR application |
| readMSdata.direct | readMSdata.direct |
| readScantype | Convert scantype string to readable output |
| RmsDefaultSettings | Load default RMassScreening settings |
| RmsSettingsTemplate | Create RMassScreening settings template file |
| runViewer | Run the results viewer |
| sampleSelector | Generalized sample selector which hopefully works... |
| screenProfiles | Screen for suspect masses in a profile container. |
| selectSpectraProfiles | Select spectra for profile container |
| submatrix | Make RAMClust input submatrix for a retention time window |
