readMSdata.direct: readMSdata.direct

Description Usage Arguments Value Author(s)

Description

Creates a MSlist object directly from a readMzXmlFile list (i.e. allows for manipulating the list beforehand) Otherwise c/p from enviPick::readMSdata()

Usage

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readMSdata.direct(mz1, MSlevel = c(1), progbar = FALSE, minRT = FALSE,
  maxRT = FALSE, minmz = FALSE, maxmz = FALSE)

Arguments

mz1

mzXML raw object to extract from (as read by readMzXmlFile)

MSlevel

MS level to extract

progbar

progress bar, as readMSdata

minRT

RT lower bound to extract

maxRT

RT upper bound to extract

minmz

m/z lower bound to extract

maxmz

m/z upper bound to extract

Value

MSlist object for peak picking with enviPick

Author(s)

stravsmi, mostly copied from Martin Loos


meowcat/RMassScreening documentation built on Jan. 9, 2020, 10:49 p.m.