API for metaOmic/MetaDE
MetaDE: Transcriptome meta-analysis for differentially expressed gene detection

Global functions
CDF.rop Source code
Indi.DE.Analysis Man page Source code
Leukemia Man page
LeukemiaLabel Man page
MetaDE Man page Source code
MetaDE.ES Source code
MetaDE.minMCC Source code
MetaDE.pvalue Man page Source code
Newdata Source code
NewdataCom Source code
OriginxyCall Source code
PathAnalysis Man page Source code
RankComp Source code
RankProd2 Source code
aw.fisher.stat Source code
cal.ES Source code
cal.MCC Source code
cal.logrank Source code
cal.minMCC Source code
cal.p.logrank Source code
cal.pearsonr Source code
cal.spearmanr Source code
check.dim Source code
check.exp Source code
check.indmethod Source code
check.label.for.meta Source code
check.metamethod Source code
check.parametric Source code
check.tail Source code
compute.tau2.EB Source code
compute.tau2.RML Source code
compute.wt.EB Source code
compute.wt.RML Source code
count.DEnumber Source code
draw.DEnumber Source code
emp Source code
flip.matrix Source code
gen.weights Source code
get.AW Source code
get.DESeq2 Source code
get.ES Source code
get.FEM Source code
get.PR Source code
get.Q Source code
get.REM Source code
get.REM2 Source code
get.RP Source code
get.SR Source code
get.Stouff Source code
get.Stouff.OC Source code
get.edgeR Source code
get.fisher Source code
get.fisher.OC Source code
get.limma Source code
get.limmaVoom Source code
get.maxP Source code
get.maxP.OC Source code
get.minMCC Source code
get.minP Source code
get.minP.OC Source code
get.p.logrank Source code
get.p.pearsonr Source code
get.p.spearmanr Source code
get.roP Source code
get.roP.OC Source code
get.sam Source code
get.sample.label.number Source code
get.tau2 Source code
heatmap.sig.genes Man page Source code
ind.cal.ES Source code
intFunc Source code
mirror.matrix Source code
order.genes.AW Source code
order.genes.simple Source code
pathways Man page
perm.lab Source code
perm.p Source code
permut Source code
plot.matrix Source code
posthoc.aw Man page Source code
rotate180.matrix Source code
summary.meta Man page Source code
uncondTopDist Source code
metaOmic/MetaDE documentation built on Nov. 9, 2018, 3 a.m.