impCML: Feature importance from Consensus Machine Learning (CML)

Description Usage Arguments Value

View source: R/machinelearning.R

Description

Returns feature importance from fitting a model using CML

Usage

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impCML(
  df,
  classes,
  trainindices,
  seed,
  algo.opt = c("lasso", "rf", "svm", "xgb"),
  standtable = FALSE,
  ranksummary = "median"
)

Arguments

df

Valid data object.

classes

Vector of class specifying test or training set among instances.

trainindices

Indices of traning instances in data.

seed

Random seed to use in model fitting.

algo.opt

Algorithms to use for consensus method.

standtable

Boolean, whether to return a standard output table summarizing results.

ranksummary

Method to compute rank summary among algorithms used, currently supports 'median'.

Value

Consensus feature importance.


metamaden/cmlmanuscript documentation built on Dec. 12, 2019, 7:53 a.m.