T50.anova: T50.anova

In micdimu/ecoseeds: Seed ecology - germination and morphometric analysis

Description

The function performs ANOVA and Tukey test. The results are plotted using boxplots, different letters indicate significant differences among test. The figure is automatically saved in 16:9 at 300 dpi.

Usage

T50.anova(Germination.Analysis.output, colour = "yes", Test.int)

Arguments

Germination.Analysis.output	output from Germination.Analysis function
colour	can be "yes" (coloured by test.type) or "no" (B/W output) or a vector that specify the groups of tests (length of vector must be equal to n° of petri)
Test.int	character vector where are indicated the types of tests that would be compared

Value

Anova	anova results, summary(aov)
Tukey	Post-hoc Tukey test output
Test	Tests compared
T50	T50 for each test analysed
Boxplot_T50	ggplot output

Author(s)

Michele Di Musciano ([e-mail])

Examples

## load file and run the function

file_germ<-read.csv("your_germination_file.csv", sep=";", header=T)

Germination.Analysis.output<-Germination.Analysis(file_germ, Nv.seed = NULL, n.seed=20, cv=1.5)

T50.anova(Germination.Analysis.output, colour = "yes")

micdimu/ecoseeds documentation built on Aug. 10, 2020, 10:34 p.m.