get_sph_shorthand: Generation of different shorthand notation level This...

In michaelwitting/lipidomicsUtils: Utility functions for lipidomics

Description

Generation of different shorthand notation level

This function simplifies a given shorthand notation to a lower level notation, e.g. Cer(d16:1(4E,1OH,3OH,15Me)/22:0) to Cer(d17:1/22:0) or Cer(d39:1).

Usage

get_sph_shorthand(x, level = c("structural", "molecular", "species"))

Arguments

x	Shorthand notation of a fatty acyl lipid, e.g. Cer(d16:1(4E,1OH,3OH,15Me)/22:0)
level	Either structural, molecular or species for the respective levels according to SwissLipids hierachy

Author(s)

Michael Witting, [e-mail]

Examples

library(lipidomicsUtils)
get_gl_shorthand("Cer(d16:1(4E,1OH,3OH,15Me)/22:0)")

michaelwitting/lipidomicsUtils documentation built on Nov. 10, 2019, 1:17 a.m.