View source: R/prepare_dataset.R
prepare_dataset | R Documentation |
Calculates values for visualization from input data file - both experimental and theoretical. All parameters are needed.
prepare_dataset( dat, in_state_first, chosen_state_first, out_state_first, in_state_second, chosen_state_second, out_state_second )
dat |
data frame with data from DynamX file |
in_state_first |
string in form "state_time" for first state in in time |
chosen_state_first |
string in form "state_time" for chosen state in in time |
out_state_first |
string in form "state_time" for first state in out time |
in_state_second |
string in form "state_time" for second state in in time |
chosen_state_second |
string in form "state_time" for second state in chosen time |
out_state_second |
string in form "state_time" for second state in out time |
...
This is the first version - multi-state calculations are not supported.
data frame with calculated values
read_hdx
# load example data dat <- read_hdx(system.file(package = "HaDeX", "HaDeX/data/KD_180110_CD160_HVEM.csv")) # prepare dataset for states `CD160` and `CD160_HVEM` in given time parameters prepare_dataset(dat, in_state_first = "CD160_0.001", chosen_state_first = "CD160_1", out_state_first = "CD160_1440", in_state_second = "CD160_HVEM_0.001", chosen_state_second = "CD160_HVEM_1", out_state_second = "CD160_HVEM_1440")
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