API for michbur/biogram
N-Gram Analysis of Biological Sequences

Global functions
aaprop Man page
add_1grams Man page Source code
add_1grams_positioned Source code
as.data.frame.feature_test Man page Source code
binarize Man page Source code
biogram Man page
biogram-package Man page
build_and_test Source code
calc_criterion Man page Source code
calc_cs Man page Source code
calc_ed Man page Source code
calc_ed_single Source code
calc_ig Man page Source code
calc_kl Man page Source code
calc_max_grams Source code
calc_occurences Source code
calc_pi Man page Source code
calc_pi_hidden Source code
calc_si Man page Source code
calc_si_hidden Source code
check_criterion Source code
cluster_reg_exp Man page Source code
code_ngrams Man page Source code
construct_ngrams Man page Source code
count_df Source code
count_multigrams Man page Source code
count_ngrams Man page Source code
count_ngrams_helper Source code
count_single_positioned_ngram Source code
count_single_unpositioned_ngram Source code
count_specified Man page Source code
count_total Man page Source code
create_criterion_distribution Source code
create_encoding Man page Source code
create_feature_target Man page Source code
create_feature_test Source code
create_merges Source code
create_ngrams Man page Source code
create_region Source code
criterion_distribution Man page
cut.feature_test Man page Source code
decode_ngrams Man page Source code
decode_single_ngrams Source code
degenerate Man page Source code
distr_crit Man page Source code
encoding2df Man page Source code
encoding2matrix Source code
entlog Source code
fast_crosstable Man page Source code
feature_test Man page
full2simple Man page Source code
gap_ngrams Man page Source code
gap_single_ngram Source code
generate_sequence Man page Source code
generate_single_region Man page Source code
generate_single_unigram Man page Source code
generate_unigrams Man page Source code
get_ngrams_ind Man page Source code
human_cleave Man page
is_ngram Man page Source code
join_reg_exp Source code
l2n Man page Source code
list2matrix Man page Source code
n2l Man page Source code
ngrams2df Man page Source code
plot.criterion_distribution Man page Source code
position_ngrams Man page Source code
print.feature_test Man page Source code
read_fasta Man page Source code
reg_exp_df Source code
regenerate Man page Source code
regional_param Man page
return_elements Source code
seq2ngrams Man page Source code
seq2ngrams_helper Source code
simple2full Man page Source code
summary.feature_test Man page Source code
table_ngrams Man page Source code
test_features Man page Source code
validate_encoding Man page Source code
write_encoding Man page Source code
michbur/biogram documentation built on Nov. 12, 2018, 7:44 p.m.