l2n: Convert letters to numbers
In michbur/biogram: N-Gram Analysis of Biological Sequences
l2n R Documentation
Convert letters to numbers
Description
Converts biological sequence from letter to number notation.
Usage
l2n(seq, seq_type)
Arguments
seq
character vector or matrix representing single sequence.
seq_type
the type of sequence. Can be rna, dna or prot.
Value
a numeric vector or matrix containing converted elements.
See Also
l2n is a wrapper around degenerate.
Inverse function: n2l.
Examples
sample_seq <- c("a", "d", "d", "g", "a", "g", "n", "a", "l")
l2n(sample_seq, "prot")
michbur/biogram documentation built on Feb. 4, 2024, 6:38 p.m.
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| l2n | R Documentation |
Convert letters to numbers
Description
Converts biological sequence from letter to number notation.
Usage
l2n(seq, seq_type)
Arguments
seq |
|
seq_type |
the type of sequence. Can be |
Value
a numeric vector or matrix containing converted elements.
See Also
l2n is a wrapper around degenerate.
Inverse function: n2l.
Examples
sample_seq <- c("a", "d", "d", "g", "a", "g", "n", "a", "l")
l2n(sample_seq, "prot")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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