microbiome/mia: Microbiome analysis

mia implements tools for microbiome analysis based on the SummarizedExperiment, SingleCellExperiment and TreeSummarizedExperiment infrastructure. Data wrangling and analysis in the context of taxonomic data is the main scope. Additional functions for common task are implemented such as community indices calculation and summarization.

Getting started

Package details

Bioconductor views DataImport Microbiome Software
Maintainer
LicenseArtistic-2.0 | file LICENSE
Version1.15.6
URL https://github.com/microbiome/mia
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("microbiome/mia")
microbiome/mia documentation built on Nov. 20, 2024, 1:12 a.m.