par.replicate: par.replicate

In mikeod38/dauergut: Scripts for rict-1 dauer paper

Description

wrapper fo parSapply to mimic replicate in base R for parallel

Usage

par.replicate(cl, n, expr, simplify = FALSE)

Arguments

cl	cluster connections from parallel::makeCluster
n	number of replicates, or number of simulations
expr	expression or function to use in replicate
simplify	wrapper to simplify within parSapply, usually FALSE

Examples

library(parallel) 
cl <- makeCluster(2) 
clusterEvalQ(cl,  { library(MASS)
library(magrittr)
library(dplyr)
library(lme4)
library(rstan)
library(rstanarm)
})
clusterExport(cl=cl, varlist=c("sim_dauer_3G_stan", "settings"))
simulation <- do.call( rbind, par.replicate(cl,n=1000, 
sim_dauer_3G_stan(c(settings,
do.plot = FALSE, 
do.stan = TRUE)), 
simplify=FALSE ))

mikeod38/dauergut documentation built on May 30, 2019, 7:16 p.m.