API for mirjamlaager/mrsamcmc
An Implementation of Data Augmented MCMC for Inference on MRSA Transmission
| Global functions | |
|---|---|
| .onAttach | Source code |
| col_pop | Man page Source code |
| count_false_negative_tests | Man page Source code |
| count_tests_forward_simulations | Man page Source code |
| count_true_positive_tests | Man page Source code |
| daily_col_prob | Source code |
| daily_col_prob_precalculated | Man page Source code |
| generate_configuration | Man page Source code |
| generate_priors | Man page Source code |
| get_ap | Source code |
| get_ap_with_types | Source code |
| log_lik_importation | Man page Source code |
| log_lik_overall | Man page Source code |
| log_lik_overall_with_types | Man page Source code |
| log_lik_rho | Man page Source code |
| log_lik_sources | Man page Source code |
| log_lik_transmission | Man page Source code |
| log_lik_transmission_patient_subset | Source code |
| onward_check | Man page Source code |
| patient_data_simulated | Man page |
| posterior_predictive_checks | Man page Source code |
| run_forward_simulations | Man page Source code |
| run_mcmc | Man page Source code |
| run_mcmc_with_types | Man page Source code |
| update_onward_transmission | Man page Source code |
