plotSmoothScatter: Creates a smooth scatter plot

In mitterecker/cn.farms: cn.FARMS - factor analysis for copy number estimation

Description

Creates a smooth scatter plot

Usage

plotSmoothScatter(object, variable, chrom, start, end, ylim, pdfname, ...)

Arguments

object	An instance of ExpressionSet.
variable	States which variable of the assayData should be plotted.
chrom	The chromosome you want to plot.
start	The physical start position.
end	The physical end position.
ylim	The limits for the y axis.
pdfname	The name of the pdf file.
...	Further arguments passed to smoothScatter function.

Value

A graph.

Author(s)

Andreas Mitterecker

Examples

load(system.file("exampleData/slData.RData", package = "cn.farms"))
plotSmoothScatter(slData[, 1:3], chrom = "23")

mitterecker/cn.farms documentation built on March 10, 2020, 10:19 a.m.