mjdufort/RNAseQC: Helper functions for conducting quality control of RNAseq data.
Version 0.0.0.9004

This package includes functions to assist with quality control of RNAseq data. It includes functions for running PCA, plotting PCA output, plotting quality metrics, estimating and plotting read saturation, inferring the sex of a sample source from X- and Y-chromosome reads, determining and plotting correlations between clinical/quality variables and PCs.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0.0.9004
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("mjdufort/RNAseQC")
mjdufort/RNAseQC documentation built on April 19, 2018, 9:22 p.m.