plot_PC_loadings: Plot PC loadings
In mjdufort/RNAseQC: Helper functions for conducting quality control of RNAseq data
View source: R/plot_PC_loadings.R
plot_PC_loadings R Documentation
Plot PC loadings
Description
Plot the loadings of each variable on each principal component. Each variable is plotted as a colored line.
In the future, I may expand this function to take prcomp and princomp objects, and to provide additional
handles for manipulating the plots (e.g. number of variables and/or number of PCs to plot), outputting
to pdf, etc.
Usage
plot_PC_loadings(rotation_matrix)
Arguments
rotation_matrix
a PCA rotation or loading matrix. Should have genes in rows and PCs in columns.
mjdufort/RNAseQC documentation built on April 19, 2024, 3:13 p.m.
R Package Documentation
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View source: R/plot_PC_loadings.R
| plot_PC_loadings | R Documentation |
Plot PC loadings
Description
Plot the loadings of each variable on each principal component. Each variable is plotted as a colored line. In the future, I may expand this function to take prcomp and princomp objects, and to provide additional handles for manipulating the plots (e.g. number of variables and/or number of PCs to plot), outputting to pdf, etc.
Usage
plot_PC_loadings(rotation_matrix)
Arguments
rotation_matrix |
a PCA rotation or loading matrix. Should have genes in rows and PCs in columns. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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