EICplot: EICplot

In mjhelf/Metaboseek: Metaboseek platform

EICplot

Description

generate one EIC plot for multiple files in one plot window.

Usage

EICplot(
  EICs,
  cx = 1,
  ylim = c(0, max(unlist(EICs[[1]][, "tic"]))),
  xlim = c(min(unlist(EICs[[1]][, "rt"])), max(unlist(EICs[[1]][, "rt"])))/60,
  legendtext = paste(sub("^([^.]*).*", "\\1", basename(row.names(EICs[[1]])))),
  colr = topo.colors(nrow(EICs[[1]]), alpha = 1),
  heading = "test",
  relto = NULL,
  TIC = F,
  single = F,
  midline = 100,
  lw = 1,
  yzoom = 1,
  ylabshift = 0
)

Arguments

EICs	item from a list of EICs from Metaboseek:multiEIC
cx	character expansion (font size) factor
ylim	numeric(2) min and max visible rt value (in seconds)
xlim	numeric(2) min and max visible intensity value (in seconds)
legendtext	character() with item for each shown EIC for the plot legend
colr	color range (actual vector of color values)
heading	plot title
relto	normalize intensities to this number
TIC	if TRUE plot TIC
single	TRUE if this is not part of a composite plot
midline	numeric() of y-axis positions where a dotted vertical line should be plotted
lw	line width for plot lines
yzoom	zoom factor into y-axis
ylabshift	shift horizontal position of y axis label

Value

sends a single EIC plot to the current plotting device

mjhelf/Metaboseek documentation built on April 23, 2022, 12:09 p.m.