| .calculateM |
Man page
Source code
|
| .characterTail |
Source code
|
| .getFTFormat |
Man page
Source code
|
| .onAttach |
Source code
|
| .onLoad |
Source code
|
| .peakArea |
Source code
|
| .reformatFeatureTable |
Man page
Source code
|
| .withHistory |
Man page
Source code
|
| ChangeFTGroupingModule |
Man page
Source code
|
| ChangeFTGroupingModuleUI |
Man page
Source code
|
| ColumnSelModule |
Man page
Source code
|
| ColumnSelModuleUI |
Man page
Source code
|
| DownloadPlotWidget |
Man page
Source code
|
| DownloadPlotWidgetUI |
Man page
Source code
|
| EICOptionsModule |
Man page
Source code
|
| EICOptionsModuleUI |
Man page
Source code
|
| EICgeneral |
Man page
Source code
|
| EICmodule |
Man page
Source code
|
| EICmoduleUI |
Man page
Source code
|
| EICplot |
Man page
Source code
|
| EICtitles |
Man page
Source code
|
| FTAnalysisParam |
Man page
Source code
|
| FTAnalysisParam-class |
Man page
|
| FTAnova |
Man page
|
| FTAnova,MseekFT-method |
Man page
|
| FTBasicAnalysis |
Man page
|
| FTBasicAnalysis,MseekFT-method |
Man page
|
| FTCluster |
Man page
|
| FTCluster,MseekFT-method |
Man page
|
| FTFilter |
Man page
|
| FTFilter,MseekFT-method |
Man page
|
| FTMS2scans |
Man page
|
| FTMS2scans,MseekFT,listOrNULL-method |
Man page
|
| FTMzMatch |
Man page
|
| FTMzMatch,MseekFT-method |
Man page
|
| FTNormalizationFactors |
Man page
|
| FTNormalizationFactors,MseekFT-method |
Man page
|
| FTNormalize |
Man page
|
| FTNormalize,MseekFT-method |
Man page
|
| FTNormalize,data.frame-method |
Man page
|
| FTOldPeakShapes |
Man page
|
| FTOldPeakShapes,MseekFT,listOrNULL-method |
Man page
|
| FTPCA |
Man page
|
| FTPCA,MseekFT-method |
Man page
|
| FTPeakShapes |
Man page
|
| FTPeakShapes,MseekFT,listOrNULL-method |
Man page
|
| FTProcessHistory |
Man page
Source code
|
| FTProcessHistory-class |
Man page
|
| FTT.test |
Man page
|
| FTT.test,MseekFT-method |
Man page
|
| FTcalculateM |
Man page
|
| FTcalculateM,MseekFT-method |
Man page
|
| FTedges,MseekFT-method |
Man page
|
| FTselection |
Man page
Source code
|
| FTselection.reactivevalues |
Man page
Source code
|
| FeatureReportModule |
Man page
Source code
|
| FeatureReportModuleUI |
Man page
Source code
|
| FeatureTable |
Man page
Source code
|
| FeatureTable.reactivevalues |
Man page
Source code
|
| FeatureTable<- |
Man page
|
| FeatureTable<-.MseekFT |
Man page
|
| FeatureTable<-.data.frame |
Man page
|
| FeatureTableContainer |
Man page
Source code
|
| FeatureTableContainerUI |
Man page
Source code
|
| FilePathModule |
Man page
Source code
|
| FilePathModuleUI |
Man page
Source code
|
| FilterContainer |
Man page
Source code
|
| FilterContainerUI |
Man page
Source code
|
| FilterModule |
Man page
Source code
|
| FilterModuleUI |
Man page
Source code
|
| FindMS2ScansModule |
Man page
Source code
|
| FindMS2ScansModuleUI |
Man page
Source code
|
| FindPatternsModule |
Man page
Source code
|
| FindPatternsModuleUI |
Man page
Source code
|
| FunParam |
Man page
Man page
Source code
|
| FunParam-class |
Man page
|
| GetIntensitiesModule |
Man page
Source code
|
| GetIntensitiesModuleUI |
Man page
Source code
|
| GetSiriusWidget |
Man page
Source code
|
| GetSiriusWidgetUI |
Man page
Source code
|
| GlobalOptionsModule |
Man page
Source code
|
| GlobalOptionsModuleUI |
Man page
Source code
|
| GroupedEICModule |
Man page
Source code
|
| GroupedEICModuleUI |
Man page
Source code
|
| LabelFinder |
Man page
|
| LabelFinder,MseekFamily-method |
Man page
|
| LabelFinderModule |
Man page
Source code
|
| LabelFinderModuleUI |
Man page
Source code
|
| ListToReactiveValues |
Man page
Source code
|
| LoadDataModule |
Man page
Source code
|
| LoadDataModuleUI |
Man page
Source code
|
| LoadMSDataModule |
Man page
Source code
|
| LoadMSDataModuleUI |
Man page
Source code
|
| LoadNetworkModule |
Man page
Source code
|
| LoadNetworkModuleUI |
Man page
Source code
|
| LoadSessionModule |
Man page
Source code
|
| LoadSessionModuleUI |
Man page
Source code
|
| LoadTableModule |
Man page
Source code
|
| LoadTableModuleUI |
Man page
Source code
|
| MS2BrowserModule |
Man page
Source code
|
| MS2BrowserModuleUI |
Man page
Source code
|
| MZcalcModule |
Man page
Source code
|
| MZcalcModuleUI |
Man page
Source code
|
| MainPageContainer |
Man page
Source code
|
| MainPageContainerUI |
Man page
Source code
|
| MainPlotContainer |
Man page
Source code
|
| MainPlotContainerUI |
Man page
Source code
|
| MainTableModule |
Man page
Source code
|
| MainTableModuleUI |
Man page
Source code
|
| MassShiftsModule |
Man page
Source code
|
| MassShiftsModuleUI |
Man page
Source code
|
| MatchReferenceModule |
Man page
Source code
|
| MatchReferenceModuleUI |
Man page
Source code
|
| ModalWidget |
Man page
Source code
|
| ModalWidgetUI |
Man page
Source code
|
| MosCluster |
Man page
Source code
|
| Mseek.colors |
Man page
|
| MseekAnova |
Man page
Source code
|
| MseekContainer |
Man page
Source code
|
| MseekContainerUI |
Man page
Source code
|
| MseekContainers |
Man page
Source code
|
| MseekContainersUI |
Man page
Source code
|
| MseekExamplePreload |
Man page
Source code
|
| MseekGraphs |
Man page
|
| MseekHash |
Man page
|
| MseekHash,MseekFamily-method |
Man page
|
| MseekHeader |
Man page
Source code
|
| MseekHistoryWidget |
Man page
Source code
|
| MseekHistoryWidgetUI |
Man page
Source code
|
| MseekMinimalServer |
Man page
Source code
|
| MseekMinimalUI |
Man page
Source code
|
| MseekModules |
Man page
Source code
|
| MseekModulesUI |
Man page
Source code
|
| MseekOptions |
Man page
Source code
|
| MseekSidebar |
Man page
Source code
|
| MseekWidgets |
Man page
Source code
|
| MseekWidgetsUI |
Man page
Source code
|
| MultiEICmodule |
Man page
Source code
|
| MultiEICmoduleUI |
Man page
Source code
|
| MultiFilterModule |
Man page
Source code
|
| MultiFilterModuleUI |
Man page
Source code
|
| MultiSpecmodule |
Man page
Source code
|
| MultiSpecmoduleUI |
Man page
Source code
|
| MzqueryModule |
Man page
Source code
|
| MzqueryModuleUI |
Man page
Source code
|
| NetworkModule |
Man page
Source code
|
| NetworkModuleUI |
Man page
Source code
|
| OptionsContainer |
Man page
Source code
|
| OptionsContainerUI |
Man page
Source code
|
| Parentsearch |
Man page
|
| PatternFinder |
Man page
|
| PatternFinder,MseekFamily-method |
Man page
|
| PcaViewModule |
Man page
Source code
|
| PcaViewModuleUI |
Man page
Source code
|
| PeakPickModule |
Man page
Source code
|
| PeakPickModuleUI |
Man page
Source code
|
| PeptideAnnotationModule |
Man page
Source code
|
| PeptideAnnotationModuleUI |
Man page
Source code
|
| PeptideCalcModule |
Man page
Source code
|
| PeptideCalcModuleUI |
Man page
Source code
|
| PeptideModificationsModule |
Man page
Source code
|
| PeptideModificationsModuleUI |
Man page
Source code
|
| PeptideSequencePlotWidget |
Man page
Source code
|
| PeptideSequencePlotWidgetUI |
Man page
Source code
|
| PlotBrowserModule |
Man page
Source code
|
| PlotBrowserModuleUI |
Man page
Source code
|
| PlotModule |
Man page
Source code
|
| PlotModuleUI |
Man page
Source code
|
| PlotWindow |
Man page
Source code
|
| QuickPlotsModule |
Man page
Source code
|
| QuickPlotsModuleUI |
Man page
Source code
|
| RTplot |
Man page
Source code
|
| RatioPlotModule |
Man page
Source code
|
| RatioPlotModuleUI |
Man page
Source code
|
| RegroupMSDataModule |
Man page
Source code
|
| RegroupMSDataModuleUI |
Man page
Source code
|
| RenameTableModule |
Man page
Source code
|
| RenameTableModuleUI |
Man page
Source code
|
| RtCorrViewModule |
Man page
Source code
|
| RtCorrViewModuleUI |
Man page
Source code
|
| SaveNetworkModule |
Man page
Source code
|
| SaveNetworkModuleUI |
Man page
Source code
|
| SaveSessionModule |
Man page
Source code
|
| SaveSessionModuleUI |
Man page
Source code
|
| SaveTableModule |
Man page
Source code
|
| SaveTableModuleUI |
Man page
Source code
|
| SelectActiveTableModule |
Man page
Source code
|
| SelectActiveTableModuleUI |
Man page
Source code
|
| SelectMS2Module |
Man page
Source code
|
| SelectMS2ModuleUI |
Man page
Source code
|
| SelectMSGroupingModule |
Man page
Source code
|
| SelectMSGroupingModuleUI |
Man page
Source code
|
| SelectProjectFolderModule |
Man page
Source code
|
| SelectProjectFolderModuleUI |
Man page
Source code
|
| ShowSiriusModule |
Man page
Source code
|
| ShowSiriusModuleUI |
Man page
Source code
|
| SimplifyNetworkModule |
Man page
Source code
|
| SimplifyNetworkModuleUI |
Man page
Source code
|
| SiriusModule |
Man page
Source code
|
| SiriusModuleUI |
Man page
Source code
|
| SiriusOptionsModule |
Man page
Source code
|
| SiriusOptionsModuleUI |
Man page
Source code
|
| SpecModule2 |
Man page
Source code
|
| SpecModule2UI |
Man page
Source code
|
| Specmodule |
Man page
Source code
|
| SpecmoduleUI |
Man page
Source code
|
| SpecplotWidget |
Man page
Source code
|
| SpecplotWidgetUI |
Man page
Source code
|
| SwitchButton |
Man page
Source code
|
| SwitchButtonUI |
Man page
Source code
|
| TableAnalysisModule |
Man page
Source code
|
| TableAnalysisModuleUI |
Man page
Source code
|
| TableModule |
Man page
Source code
|
| TableModule2 |
Man page
Source code
|
| TableModule2UI |
Man page
Source code
|
| TableModuleUI |
Man page
Source code
|
| TableUpdateChunk |
Man page
Source code
|
| UploadTableModule |
Man page
Source code
|
| UploadTableModuleUI |
Man page
Source code
|
| VennDiagramModule |
Man page
Source code
|
| VennDiagramModuleUI |
Man page
Source code
|
| VennWidgetModule |
Man page
Source code
|
| VennWidgetModuleUI |
Man page
Source code
|
| WelcomePageModule |
Man page
Source code
|
| WelcomePageModuleUI |
Man page
Source code
|
| activeFT |
Man page
Source code
|
| activeFT<- |
Man page
|
| addLines |
Man page
Source code
|
| addProcessHistory |
Man page
|
| addProcessHistory,MseekFamily,ProcessHistory-method |
Man page
|
| analyzeFT |
Man page
|
| analyzeFT,MseekFT,listOrNULL,FTAnalysisParam-method |
Man page
|
| analyzeTable |
Man page
Source code
|
| asInclusionlist |
Man page
Source code
|
| asMetaboAnalyst |
Man page
Source code
|
| assignColor |
Man page
Source code
|
| bestgauss |
Man page
Source code
|
| buildMseekFT |
Man page
|
| buildMseekFT,XCMSnExp-method |
Man page
|
| buildMseekFT,data.frame-method |
Man page
|
| buildMseekFT,xsAnnotate-method |
Man page
|
| buildMseekGraph |
Man page
|
| calcMZs |
Man page
Source code
|
| cameraWrapper |
Man page
Source code
|
| checkFolders |
Man page
Source code
|
| colorRampLegend |
Man page
Source code
|
| constructFeatureTable |
Man page
Source code
|
| constructRawLayout |
Man page
Source code
|
| dashboardHeaderM |
Man page
|
| densplot |
Man page
Source code
|
| densplotModuleUI |
Man page
Source code
|
| densplotWidget |
Man page
Source code
|
| error,ProcessHistory-method |
Man page
|
| exIntensities |
Man page
|
| fastPeakShapes |
Man page
Source code
|
| featlistCompare |
Man page
Source code
|
| featureCalcs |
Man page
Source code
|
| featureReport |
Man page
Source code
|
| featureTableNormalize |
Man page
|
| filenamemaker |
Man page
Source code
|
| findLabeledPeaks |
Man page
|
| findLabels |
Man page
Source code
|
| findMSnScans |
Man page
Source code
|
| findMSnScans.OnDiskMSnExp |
Man page
Source code
|
| findMSnScans.reactivevalues |
Man page
Source code
|
| find_peaks2 |
Man page
Source code
|
| findsubgraph |
Man page
Source code
|
| foldChange |
Man page
Source code
|
| getAllScans |
Man page
Source code
|
| getFilters |
Man page
Source code
|
| getMseekIntensities |
Man page
|
| getMseekIntensities,MseekFT,listOrNULL,MseekFTOrNULL-method |
Man page
|
| getMseekIntensities,MseekFT,listOrNULL,missing-method |
Man page
|
| getScanInfo |
Man page
Source code
|
| getSirius |
Man page
Source code
|
| getSiriusTree |
Man page
Source code
|
| getSpecList,MseekFT,listOrNULL-method |
Man page
|
| getSpectra |
Man page
Source code
|
| getSpectra.OnDiskMSnExp |
Man page
Source code
|
| getSpectra.reactivevalues |
Man page
Source code
|
| get_common_dir |
Man page
Source code
|
| getgauss |
Man page
|
| getpeaks2 |
Man page
Source code
|
| gm_mean |
Man page
Source code
|
| groupPlot |
Man page
Source code
|
| groupedplot |
Man page
Source code
|
| groupingTable,MseekFamily-method |
Man page
|
| groupingTable<-,MseekFamily,data.frame-method |
Man page
|
| hasAdjustedRtime |
Man page
|
| hasAdjustedRtime,MseekFamily-method |
Man page
|
| hasError,ProcessHistory-method |
Man page
|
| intensityCols,MseekFamily-method |
Man page
|
| intensityCols<-,MseekFamily-method |
Man page
|
| is.MseekFT |
Man page
Source code
|
| is.MseekFamily |
Man page
Source code
|
| is.MseekGraph |
Man page
Source code
|
| layout_components_qgraph |
Man page
|
| legendplot |
Man page
Source code
|
| limitComponents,MseekGraph-method |
Man page
|
| listMS2scans |
Man page
Source code
|
| loadMseekFT |
Man page
|
| loadMseekFT,character-method |
Man page
|
| loadMseekGraph |
Man page
|
| loadMseekGraph,character-method |
Man page
|
| loadMseekSession |
Man page
Source code
|
| loadRawM |
Man page
|
| mActionButton |
Man page
Source code
|
| mDownloadButton |
Man page
|
| makeColorscheme |
Man page
Source code
|
| makeRTlist2 |
Man page
Source code
|
| makeScanlist2 |
Man page
Source code
|
| massquery |
Man page
Source code
|
| matchReference,MseekFT,MseekFT-method |
Man page
|
| matchReference,MseekGraph,MseekFT-method |
Man page
|
| matchedToCharacter |
Man page
Source code
|
| mergeMSold |
Man page
Source code
|
| mergecollectlist |
Man page
Source code
|
| mergecollectlist2 |
Source code
|
| mergepeaks2 |
Man page
Source code
|
| multiEIC |
Man page
|
| multiEICplus |
Man page
|
| multittest |
Man page
|
| mzMatch |
Man page
Source code
|
| parsePatterns |
Man page
Source code
|
| parseTitle |
Man page
Source code
|
| peakDetect |
Man page
Source code
|
| peakFitter |
Man page
Source code
|
| peakFunction |
Man page
Source code
|
| plotSMILE |
Man page
Source code
|
| plotTree |
Man page
Source code
|
| plotlyTextFormatter |
Man page
Source code
|
| plotpeaks |
Man page
Source code
|
| previousStep |
Man page
|
| previousStep,MseekFamily-method |
Man page
|
| processHistory |
Man page
|
| processHistory,MseekFamily-method |
Man page
|
| quickMergeMS |
Man page
Source code
|
| rawEICm |
Man page
Source code
|
| rawGrouping |
Man page
Source code
|
| reactiveValuesToListRec |
Man page
Source code
|
| reconstructValues |
Man page
Source code
|
| removeNAs |
Man page
|
| removeNAs,MseekFT-method |
Man page
|
| rename |
Man page
|
| rename,MseekFamily-method |
Man page
|
| reverselog_trans |
Man page
Source code
|
| rtadjust |
Man page
Source code
|
| rtexport |
Man page
Source code
|
| runMseek |
Man page
Source code
|
| runPeptideApp |
Man page
Source code
|
| runSirius |
Man page
Source code
|
| safelog |
Man page
Source code
|
| saveMseekFT |
Man page
|
| saveMseekFT,MseekFT-method |
Man page
|
| saveMseekGraph |
Man page
|
| saveMseekGraph,MseekGraph-method |
Man page
|
| saveMseekSession |
Man page
Source code
|
| saveScanlist |
Man page
Source code
|
| savetable |
Man page
Source code
|
| searchFunParam,MseekFamily-method |
Man page
|
| setLayout |
Man page
|
| setLayout,MseekGraph-method |
Man page
|
| show,FTProcessHistory-method |
Man page
|
| simpleTableModule |
Man page
Source code
|
| simpleTableModuleUI |
Man page
Source code
|
| simplify,MseekGraph-method |
Man page
|
| simplifyGraph |
Man page
Source code
|
| specplot |
Man page
|
| specplot2 |
Man page
|
| subsetEICs |
Man page
Source code
|
| tableGrouping |
Man page
Source code
|
| tableWriter |
Man page
Source code
|
| updateDF |
Man page
Source code
|
| updateFT |
Man page
Source code
|
| updateFTIndex |
Man page
Source code
|
| updateFTgrouping |
Man page
Source code
|
| updateFeatureTable |
Man page
Source code
|
| updateRawLayout |
Man page
Source code
|
| updaterModule |
Man page
Source code
|
| updaterModuleUI |
Man page
Source code
|
| values |
Man page
|
| writeMS |
Man page
Source code
|
| writeStatus |
Man page
Source code
|
| xcmsWidget |
Man page
Source code
|
| xcmsWidgetUI |
Man page
Source code
|
