fisher.test.pval: Calculate the significance of the association between two...
In mjwestgate/sppairs: Species Pairwise Association Analysis (SPAA)
Description
Usage
Arguments
Value
Description
Calculate the significance of the odds ratio between two vectors
Usage
1
fisher.test.pval(dataset)
Arguments
dataset
Two column data.frame, with presence/absence of two species
Value
Returns a value derived from the significance of the odds ratio between two species. Note that this version is experimental and has some unusual properties that might be subject to change. At present, the function runs two tests, to determine whether the odds ratio is significantly greater or less than one. It then returns 1-P, multiplied by -1 for negative associations. This means the resulting vector of pairwise assocations can be easily drawn (as it ranges from -1 to 1, with extreme values signifying strong -ve or +ve effects); but it is not a sensible statistic to report in this format.
mjwestgate/sppairs documentation built on May 23, 2019, 1:05 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Calculate the significance of the odds ratio between two vectors
Usage
1 | fisher.test.pval(dataset)
|
Arguments
dataset |
Two column data.frame, with presence/absence of two species |
Value
Returns a value derived from the significance of the odds ratio between two species. Note that this version is experimental and has some unusual properties that might be subject to change. At present, the function runs two tests, to determine whether the odds ratio is significantly greater or less than one. It then returns 1-P, multiplied by -1 for negative associations. This means the resulting vector of pairwise assocations can be easily drawn (as it ranges from -1 to 1, with extreme values signifying strong -ve or +ve effects); but it is not a sensible statistic to report in this format.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.