summary_sd_CI: Provides summary table with Critical interval and standard...

In mkajano/HDXBoxeR: Analysis of Hydrogen-Deuterium Exchange Mass-Spectrometry Data

Provides summary table with Critical interval and standard deviation within the set.

Description

Returns summary data. Function returns: Protein states, timepoints, number of replicates, # peptides, % coveregae, average peptide length and redundancy.

Usage

summary_sd_CI(filepath, replicates = 3)

Arguments

filepath	filepath to the input file. Input file is All_results table from HDX_Examiner, where all the fields are marked for export.
replicates	number of replicates. Default set to 3.

Value

Returns summary table.

Examples

file_nm<-system.file("extdata", "All_results_table.csv", package = "HDXBoxeR")
a<- summary_sd_CI(file_nm, replicates=3)

mkajano/HDXBoxeR documentation built on April 23, 2024, 12:28 a.m.