getMutationRate: Make a table for mutation rate of each gene in the cohort

In mksamur/RTCGAToolbox: A new tool for exporting TCGA Firehose data

Make a table for mutation rate of each gene in the cohort

Description

Make a table for mutation rate of each gene in the cohort

Usage

getMutationRate(dataObject)

Arguments

dataObject

This must be FirehoseData object.

Value

Returns a data table

Examples

data(accmini)
mutRate <- getMutationRate(dataObject=accmini)
mutRate <- mutRate[order(mutRate[,2],decreasing = TRUE),]
head(mutRate)

mksamur/RTCGAToolbox documentation built on Oct. 29, 2023, 10:06 p.m.