extract_map: Extract the maker position from an object of class...
In mmollina/MAPPoly: Genetic Linkage Maps in Autopolyploids

extract_map

R Documentation

Extract the maker position from an object of class 'mappoly.map'

Description

Extract the maker position from an object of class 'mappoly.map'

Usage

extract_map(input.map, phase.config = "best")

Arguments

`input.map`	An object of class `mappoly.map`
`phase.config`	which phase configuration should be used. "best" (default) will choose the maximum likelihood configuration

Examples

 x <- maps.hexafake[[1]]$info$genome.pos/1e6
 y <- extract_map(maps.hexafake[[1]])
 plot(y~x, ylab = "Map position (cM)", xlab = "Genome Position (Mbp)")

mmollina/MAPPoly documentation built on March 8, 2024, 2:04 a.m.