validate_downloaded_runs: Check that the downloaded runs are not corrupted
In momeara/CalCEN: CalCEN: Estimate Co-Expression Networks
validate_downloaded_runs R Documentation
Check that the downloaded runs are not corrupted
Description
use vdb-validate from the prefetch package to validate all
all .sra files under <sra_dir>.
Usage
validate_downloaded_runs(sra_dir)
Arguments
sra_dir:
path to find downloaded SRA runs
Details
<sra_dir>/<run_accession>/<run_accession>.sra
momeara/CalCEN documentation built on Jan. 3, 2023, 7:22 p.m.
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| validate_downloaded_runs | R Documentation |
Check that the downloaded runs are not corrupted
Description
use vdb-validate from the prefetch package to validate all all .sra files under <sra_dir>.
Usage
validate_downloaded_runs(sra_dir)
Arguments
sra_dir: |
path to find downloaded SRA runs |
Details
<sra_dir>/<run_accession>/<run_accession>.sra
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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