plot_firing_rate_by_neuron: Firing rate by neuron

In momeara/mema: Multi-Electrode Midbrain Analysis

Firing rate by neuron

Description

histogram of average firing rate x-axis firing rate on the log-scale y-axis number of neurons in the histogram bin

Usage

plot_firing_rate_by_neuron(
  experiment,
  plot_width = 7,
  plot_height = 4,
  output_base = "product/plots",
  verbose = TRUE
)

Details

if there is spread in the average firing rate then this variation should be accounted for in a model of effects of the treatment on the average firing rate

experiment: experiment dataset loaded with mema::load_experiment(...)

plot_width/plot_height: dimensions of the output plot

returns: the ggplot2 Saves the result to product/plots/firing_rate_by_neuron_<experiment_tag>_<date_code>.(pdf|png) It save both .pdf and .png because it's easier to email etc small pngs while for use in an a manuscript having the vector version means that it can be tweaked with illustrator

momeara/mema documentation built on Nov. 4, 2022, noon