plot_unit_response_by_treatment: Unit Response Correlation by Treatment
In momeara/mema: Multi-Electrode Midbrain Analysis

View source: R/plot_unit_repsonse_correlation_by_treatment.R

plot_unit_response_by_treatment

R Documentation

Unit Response Correlation by Treatment

Description

Grid of treatment vs. treatment plots, in each cell scatter plot for each neuronal unit the x-axis is average firing rate for treatment of column the y-axis is average firing rate for treatment of row

Usage

plot_unit_response_by_treatment(
  experiment,
  highlight_units = NULL,
  plot_width = 10,
  plot_height = 10,
  output_base = "product/plots",
  verbose = TRUE
)

Details

experiment: experiment dataset loaded with mema::load_experiment(...)

highlight_units: which units to highlight in the plot

plot_width/plot_height: dimensions of the output plot

returns: the ggplot2 Saves the result to product/plots/unit_response_correlation_by_treatment_<experiment_tag>_<date_code>.(pdf|png) It save both .pdf and .png because it's easier to email etc small pngs while for use in an a manuscript having the vector version means that it can be tweaked with illustrator

momeara/mema documentation built on Nov. 4, 2022, noon