Files in montilab/BS831
Boston University - Genomics Data Mining

.Rbuildignore
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BS831.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/GeneSet.R
R/Makefile.knitr
R/data.R R/diffanalWrappers.R R/fast.tscore.R R/ggheat.continuous.R R/hcopt.R R/heatmap.R R/heatmap.ggplot.R R/hyperEnrichment.R R/installR.R R/knn.R R/ksGenescore.R R/misc.R R/misc.math.R R/mixnorm.R R/naiveBayes.R R/run_assign.R R/to.hex.R R/variationFilter.R README.md data-raw/createDatasets/CreateBreastCancer.R data-raw/createDatasets/CreateDrugMatrixSubset.R data-raw/createDatasets/CreateGSE47774_SEQC_ILM_AGR.R data-raw/createDatasets/CreateOSCCSubset.R data-raw/createDatasets/createExpressionSet.R data-raw/createDatasets/createZebra.R data-raw/createDatasets/processBRCA.R data-raw/createDatasets/processLenz.R data-raw/createDatasets/processTCGA-BRCA.R data-raw/createDatasets/processTCGA-HNSC.R data-raw/createDatasets/processTCGA-HNSCtoy.R data-raw/createZebra.R data-raw/data.R
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data/AEDAT.collapsed.mad4k.rda
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data/HNSC_RNASeq_ES.rda
data/HNSC_RNASeq_toy_ES.rda
data/HNSC_htseq_raw_counts_AEvsG1vsG3.rda
data/HNSC_htseq_raw_counts_toy_AEvsG2.rda
data/TCGA.BRCA25.rda
data/breast_loi_133p2.rda
data/dm10.rda
data/gspData.rda
data/hyper.rda
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data/zebrafish_cufflinks_counts_fpkm_eSet.rda
data/zebrafish_htseq_raw_counts_eSet.rda
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inst/extdata/GC_lengths_GRCh38.87.csv
inst/extdata/GPL4372.annot
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man/AEDAT.collapsed.Rd man/AEDAT.collapsed.mad4k.Rd man/GeneSet-class.Rd man/HNSC_RNASeq_ES.Rd man/HNSC_RNASeq_toy_ES.Rd man/HNSC_htseq_raw_counts_AEvsG1vsG3.Rd man/HNSC_htseq_raw_counts_toy_AEvsG2.Rd man/VERBOSE.Rd man/breast_loi_133p2.Rd man/dm10.Rd man/ggheat.continuous.Rd man/ggheat.continuous.group.Rd man/ggheat.continuous.single.Rd man/ggheat.make.groups.Rd man/heatmap.ggplot2.Rd man/hello.Rd man/hyperEnrichment.Rd man/renamedBreastDB.Rd man/zebrafish_cufflinks_counts_fpkm_eSet.Rd man/zebrafish_htseq_raw_counts_eSet.Rd
pkgdown/_pkgdown.yml
pkgdown/extra.css
pkgdown/extra.js
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vignettes/figs/ExpressionSet.png
vignettes/figs/diffanal.lm.png
vignettes/figs/diffanal.ttest.png
vignettes/figs/hyper.enrichment.png
vignettes/style/BS831.css
vignettes/tutorials/DiffanalysisLOAD.Rmd vignettes/tutorials/DiffanalysisTCGA_BrCa.Rmd vignettes/tutorials/Linear_vs_Logistic.Rmd vignettes/tutorials/RNAseq_GLM.Rmd vignettes/tutorials/TPMdistribution.Rmd
montilab/BS831 documentation built on Aug. 1, 2020, 5:02 a.m.