run_hyperEnrichment: 'run_hyperEnrichment' performs hyperenrichment test from...
In montilab/iEDGE: integrative analysis of (epi-)DNA and gene expression data

run_hyperEnrichment performs hyperenrichment test from gistic2ge DE results on gene sets

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run_hyperEnrichment(drawn, categories, ntotal, min.drawsize = 4,
  mht = TRUE, verbose = FALSE, order = TRUE, hypercol = "fdr",
  hyperthres = NULL)

`drawn`	list of genesets, usually from user-defined queries
`categories`	list of genesets, usually from pathway databases
`ntotal`	total number of genes

limma topTable data frame

montilab/iEDGE documentation built on Sept. 7, 2019, 4:18 a.m.

montilab/iEDGE index

README.md

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