README.md

In mpierrejean/acnr: Annotated Copy-Number Regions

acnr: annotated copy-number regions

This data package contains SNP array data from different platforms (Affymetrix and Immumina) and different types of copy-number regions. These regions were identified manually by the authors of the package and may be used to generate realistic data sets with known truth.

Currently the acnr package contains three data sets curated from GEO:

> library("acnr")
> listDataSets()
[1] "GSE11976_CRL2324" "GSE13372_HCC1143" "GSE29172_H1395"

This package was initially built to serve as a data package for the jointseg package.

Software status

| Resource: | GitHub | Travis CI | Appveyor | | ------------- | ------------------- | -------------- | ---------------- | | Platforms: | Multiple | Linux & OS X | Windows | | R CMD check | | | | | Test coverage | | | |

mpierrejean/acnr documentation built on Nov. 18, 2021, 1:03 p.m.