Files in mrc-ide/nimue
COVID-19 Vaccine Modelling
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/coverage.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/assertions.R
R/init.R
R/models.R
R/object.R
R/odin.R
R/output.R
R/parameters.R
R/prioritisation_matrix.R
R/run.R
R/weighted_efficacy.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
inst/odin/vaccine.R
inst/odin/vaccine.json
inst/shiny-nimue-fits/app/app.R
inst/shiny-nimue-fits/app/provision.yml
inst/shiny-nimue-fits/app/style.css
man/add_age.Rd
man/add_weighted_efficacy.Rd
man/administer_first_dose.Rd
man/administer_second_dose.Rd
man/assign_doses.Rd
man/beta_est_infectiousness.Rd
man/collapse_age.Rd
man/coverage.Rd
man/default_durations.Rd
man/default_probs.Rd
man/default_vaccine_pars.Rd
man/eligable_for_second.Rd
man/extract_dose_number.Rd
man/figures/README-pressure-1.png
man/figures/README-unnamed-chunk-3-1.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/structure.png
man/format.Rd
man/format_internal.Rd
man/init.Rd
man/nimue_deterministic_model.Rd
man/p_all.Rd
man/p_elderly.Rd
man/p_risk_elderly_working_children.Rd
man/p_risk_elderly_working_children_step.Rd
man/p_working_elderly_children.Rd
man/parameters.Rd
man/plot.nimue_simulation.Rd
man/run.Rd
man/strategy_matrix.Rd
man/target_pop.Rd
man/weighted_efficacy.Rd
nimue.Rproj
src/odin.c
src/registration.c
tests/testthat.R
tests/testthat/test-Strategies.R
tests/testthat/test-assertions.R
tests/testthat/test-deterministic.R
tests/testthat/test-output.R
tests/testthat/test-parameters.R
tests/testthat/test-pmcmc.R
tests/testthat/test-prioritisation.R
tests/testthat/test-weighted_efficacy.R
vignettes/.gitignore
vignettes/Coverage_and_Prioritisation.Rmd
vignettes/Efficacy.Rmd
vignettes/Model_equations.Rmd
vignettes/Supply.Rmd
