interpolate_rt: Produce piecewise linear Rt
In mrc-ide/safir2: Individual-Based Model of COVID Transmission
Description
Usage
Arguments
Value
View source: R/utils_parameters.R
Description
Make a piecewise linear interpolating vector of Rt, for each
day within the simulated interval. The assumed start of simulation
is the first date provided in dates, and the end of simulation is the last
date of dates unless max_date is provided. Interpolation is done with
inclusive endpoints.
Usage
1
interpolate_rt(dates, rt, max_date = NULL)
Arguments
dates
a vector of Dates
rt
a vector of reproductive values at those dates
max_date
the maximum date of simulation (optional)
Value
a list with named elements Rt and Rt_tt, which can be provided
to the safir::get_parameters function's arguments R0 and tt_R0.
mrc-ide/safir2 documentation built on Jan. 14, 2022, 9:37 p.m.
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Description Usage Arguments Value
View source: R/utils_parameters.R
Description
Make a piecewise linear interpolating vector of Rt, for each
day within the simulated interval. The assumed start of simulation
is the first date provided in dates, and the end of simulation is the last
date of dates unless max_date is provided. Interpolation is done with
inclusive endpoints.
Usage
1 | interpolate_rt(dates, rt, max_date = NULL)
|
Arguments
dates |
a vector of Dates |
rt |
a vector of reproductive values at those dates |
max_date |
the maximum date of simulation (optional) |
Value
a list with named elements Rt and Rt_tt, which can be provided
to the safir::get_parameters function's arguments R0 and tt_R0.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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