read_epp_data: Read EPP fitting surveillance data
In mrc-ide/specio: Read Spectrum Files
Description
Usage
Arguments
Details
Value
Examples
Description
Reads the HIV prevalence from sentinel surveillance and household
surveillance data from the EPP .xml file within a PJNZ.
Usage
1
read_epp_data(pjnz_path)
Arguments
pjnz_path
Path to Spectrum PJNZ file.
Details
EPP projection sets are identified in the .xml file by searching the XML tree
for tag "object", and then selecting objects with "class" attribute equal to
"epp2011.core.sets.ProjectionSet".
Value
List of data frames containing prevalence and incidence data.
Examples
1
2
pjnz_path <- system.file("testdata", "Botswana2018.PJNZ", package = "specio")
read_epp_data(pjnz_path)
mrc-ide/specio documentation built on April 15, 2021, 8:37 a.m.
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Description Usage Arguments Details Value Examples
Description
Reads the HIV prevalence from sentinel surveillance and household surveillance data from the EPP .xml file within a PJNZ.
Usage
1 | read_epp_data(pjnz_path)
|
Arguments
pjnz_path |
Path to Spectrum PJNZ file. |
Details
EPP projection sets are identified in the .xml file by searching the XML tree for tag "object", and then selecting objects with "class" attribute equal to "epp2011.core.sets.ProjectionSet".
Value
List of data frames containing prevalence and incidence data.
Examples
1 2 | pjnz_path <- system.file("testdata", "Botswana2018.PJNZ", package = "specio")
read_epp_data(pjnz_path)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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