Files in mrc-ide/specio
Read Spectrum Files
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md
R/array_dimensions.R
R/dp_accessors.R
R/dp_file_utils.R
R/dp_tags.R
R/extract_data.R
R/file_utils.R
R/pjn_metadata.R
R/r_utils.R
R/read_epp_results.R
R/read_hivproj_param.R
R/read_xml.R
R/xml_utils.R
R/zzz.R
README.md
images/logo.svg
inst/config.yml
inst/spectrum5_countrylist.rds
inst/testdata/Botswana2017.PJNZ
inst/testdata/Botswana2018.PJNZ
man/calc_age_specific_fertility_rate.Rd
man/calc_net_migration.Rd
man/convert_type.Rd
man/dimensions_age_14_hiv_population.Rd
man/dimensions_age_sex_year.Rd
man/dimensions_agegr_sex_year.Rd
man/dimensions_agegr_year.Rd
man/dimensions_agegr_year_alternative.Rd
man/dimensions_art.Rd
man/dimensions_cd4.Rd
man/dimensions_cd4_progress.Rd
man/extract_incidence_prevalence.Rd
man/get_agegr_labels.Rd
man/get_anc_data.Rd
man/get_array_data.Rd
man/get_array_property_data.Rd
man/get_art_mortality.Rd
man/get_art_mortality_rates.Rd
man/get_cd4_array_data.Rd
man/get_census_data.Rd
man/get_concentrated_epidemic_data.Rd
man/get_conversion_function.Rd
man/get_data.Rd
man/get_default_array.Rd
man/get_description_indices.Rd
man/get_dp_data.Rd
man/get_eligibility_pop_data.Rd
man/get_enum_property.Rd
man/get_eppxml_workset.Rd
man/get_field_data.Rd
man/get_fields.Rd
man/get_filename_from_extension.Rd
man/get_hh_survey_data.Rd
man/get_impact_model_params.Rd
man/get_incid_prev_results.Rd
man/get_last_non_na_column.Rd
man/get_pjn_country.Rd
man/get_pjn_data.Rd
man/get_pjn_metadata.Rd
man/get_pjn_region.Rd
man/get_pjn_region_code.Rd
man/get_pjnz_csv_data.Rd
man/get_projection_years.Rd
man/get_property.Rd
man/get_property_data.Rd
man/get_property_tags.Rd
man/get_raw_tag_data.Rd
man/get_resample_count.Rd
man/get_scale_cd4_mortality.Rd
man/get_tag_data.Rd
man/get_tag_notes.Rd
man/get_vector_data.Rd
man/get_women_on_art.Rd
man/next_index.Rd
man/parse_array.Rd
man/parse_matrix.Rd
man/parse_region_data.Rd
man/parse_survey.Rd
man/read_art_pop.Rd
man/read_data_from_pjnz.Rd
man/read_epp_data.Rd
man/read_epp_subpops.Rd
man/read_hiv_pop.Rd
man/read_hivproj_param.Rd
man/read_pjn_metadata.Rd
man/read_spt.Rd
man/read_spu.Rd
man/read_total_pop.Rd
man/row_contains_data.Rd
man/tidy_data_for_epp.Rd
scripts/update_web.sh
specio.Rproj
tests/testthat.R
tests/testthat/dp_testdata/2016_testdata.DP
tests/testthat/dp_testdata/2017_testdata.DP
tests/testthat/dp_testdata/malformed_data.DP
tests/testthat/helper_dp_file_utils.R
tests/testthat/helper_pjn_metadata.R
tests/testthat/helper_xml_utils.R
tests/testthat/pjn_testdata/Botswana_2018_updated_ART.PJN
tests/testthat/pjn_testdata/Mozambique_Maputo_Cidade2018.PJN
tests/testthat/pjnz_testdata/Botswana2019.PJNZ
tests/testthat/pjnz_testdata/DominicanRepublic2017.PJNZ
tests/testthat/pjnz_testdata/Malawi2019.PJNZ
tests/testthat/pjnz_testdata/Mozambique_Maputo_Cidade2018.PJNZ
tests/testthat/pjnz_testdata/Netherlands2017.PJNZ
tests/testthat/pjnz_testdata/README.md
tests/testthat/test_array_dimensions.R
tests/testthat/test_dp_accessors.R
tests/testthat/test_dp_file_utils.R
tests/testthat/test_dp_tags.R
tests/testthat/test_extract_data.R
tests/testthat/test_file_utils.R
tests/testthat/test_on_load.R
tests/testthat/test_pjn_metadata.R
tests/testthat/test_r_utils.R
tests/testthat/test_read_epp_results.R
tests/testthat/test_read_hivproj_param.R
tests/testthat/test_read_xml.R
tests/testthat/test_xml_utils.R
tests/testthat/testdata/Botswana2017_epp_data.rds
tests/testthat/testdata/Botswana2017_hivproj.rds
tests/testthat/testdata/Botswana2017_spt_data.rds
tests/testthat/testdata/Botswana2017_subpop_data.rds
tests/testthat/testdata/Botswana2018_epp_data.rds
tests/testthat/testdata/Botswana2018_hivproj.rds
tests/testthat/testdata/Botswana2018_spt_data.rds
tests/testthat/testdata/Botswana2018_subpop_data.rds
tests/testthat/testdata/Botswana2019_epp_data.rds
tests/testthat/testdata/Botswana2019_spu_data.rds
tests/testthat/testdata/Botswana2019_subpop_data.rds
tests/testthat/testdata/DominicanRepublic2017_epp_data.rds
tests/testthat/testdata/DominicanRepublic2017_hivproj.rds
tests/testthat/testdata/DominicanRepublic2017_spt_data.rds
tests/testthat/testdata/DominicanRepublic2017_subpop_data.rds
tests/testthat/testdata/Mozambique_Maputo_Cidade2018_epp_data.rds
tests/testthat/testdata/Mozambique_Maputo_Cidade2018_hivproj.rds
tests/testthat/testdata/Mozambique_Maputo_Cidade2018_spt_data.rds
tests/testthat/testdata/Mozambique_Maputo_Cidade2018_subpop_data.rds
tests/testthat/testdata/Netherlands2017_hivproj.rds
tests/testthat/testdata/README.md
tests/testthat/xml_testdata/double_array.xml
tests/testthat/xml_testdata/logical_array.xml
tests/testthat/xml_testdata/string_array.xml
tests/testthat/xml_testdata/test_array_1.xml
tests/testthat/xml_testdata/test_array_2.xml
tests/testthat/xml_testdata/test_field_node.xml
tests/testthat/xml_testdata/test_matrix.xml
tests/testthat/xml_testdata/test_nodeset.xml
tests/testthat/xml_testdata/test_ragged_matrix.xml
vignettes/.gitignore
vignettes/pjnz.Rmd
