tidy_data_for_epp: Tidy data for EPP.
In mrc-ide/specio: Read Spectrum Files

Description Usage Arguments Details Value

Helper to tidy data and add labels for use in EPP.

1 2	tidy_data_for_epp(dat, is_percentage = FALSE, add_names = FALSE, site_names = NULL)

`dat`	Data to be tidied.
`is_percentage`	True if data represents a percentage.
`add_names`	True if names should be added to the data.
`site_names`	List of site names to be used for the data.

This will convert any '-1' in the data to an NA as the Java representation of the data uses -1 to indicate no data. If is_percentage is true it will divide the data by 100 as Java representation of data is in percentage but EPP needs it as a probability. If add_names is true it will add labels to the matrix or vector. If a vector then it will use years for the names. If a matrix then it will add year labels to the columns and site labels specified by site_names to the rows.

The tidied and labelled data.

mrc-ide/specio documentation built on April 15, 2021, 8:37 a.m.