CalculateTreeDistance: Wrapper for tree distance calculations

In ms609/TreeDist: Calculate and Map Distances Between Phylogenetic Trees

Wrapper for tree distance calculations

Description

Calls tree distance functions from trees or lists of trees

Usage

CalculateTreeDistance(Func, tree1, tree2 = NULL, reportMatching = FALSE, ...)

Arguments

Func	Tree distance function.
tree1, tree2	Trees of class phylo, with leaves labelled identically, or lists of such trees to undergo pairwise comparison. Where implemented, tree2 = NULL will compute distances between each pair of trees in the list tree1 using a fast algorithm based on \insertCiteDay1985;textualTreeDist.
reportMatching	Logical specifying whether to return the clade matchings as an attribute of the score.
...	Additional arguments to Func.

Author(s)

Martin R. Smith ([e-mail])

ms609/TreeDist documentation built on Sept. 13, 2024, 12:09 a.m.